PPDB

 The Plant Proteome Database

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AT5G39940.1   FAD/NAD(P)-binding oxidoreductase family protein
Lab Annot. FAD dependent oxidoreductase (DAO domain)
Mapman: 35.2 not assigned.unknown
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39940.3 11Arabidopsis thaliana048099990 (0)M
AT5G39940.2 11Arabidopsis thaliana04471001003 (2)M
AT5G39940.4 11Arabidopsis thaliana044791910 (0)M
Os12g44160.2 7Oryza sativa6E-13737655680 (0)M
Os12g44160.1 7Oryza sativa6E-13737655680 (0)M
Os12g44160.3 7Oryza sativa7E-9530851650 (0)_
v1_GRMZM2G174554_P01 4a53Zea mays047262774 (4)M
GRMZM2G174554_P01 3.21Zea mays047262778 (8)M
Zm00001eb033100_P001 agpv5Zea mays047262770 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DAO(2) FAD_binding_2(2) FAD_oxidored(1) GIDA(2) HI0933_like(1) Lycopene_cycl(1)
TargetP: Mitochondria (Class 3 C0.149; M0.599; S0.077; _0.035)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 480 aa (-cTP 452)
Molecular Weight 52.07 kDA(-cTP )
PI 9.32(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

 22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help