PPDB

The Plant Proteome Database

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AT5G37720.1   ALWAYS EARLY 4

Lab Annot. RNA and export factor-binding protein, putative
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G37720.2 11Arabidopsis thaliana0288979715 (15)C
AT1G66260.1 11Arabidopsis thaliana9E-98303637115 (14)_
AT1G66260.2 11Arabidopsis thaliana9E-98303637114 (13)_
Os06g14470.1 7Oryza sativa5E-6030444590 (0)_
Os08g33120.1 7Oryza sativa2E-5725148665 (5)M
Os08g33120.2 7Oryza sativa3E-5224242585 (5)M
Zm00001eb179330_P005 agpv5Zea mays4E-7126950650 (0)M
Zm00001eb179330_P002 agpv5Zea mays4E-7126950650 (0)M
v1_GRMZM2G171921_P02 4a53Zea mays4E-71269506527 (27)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FoP_duplication(3) RRM_1(1) RRM_3(1)
TargetP: Chloroplast (Class 4 C0.599; M0.133; S0.002; _0.392)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 288 aa (-cTP 206)
Molecular Weight 30.44 kDA(-cTP 21.80)
PI 11.59(-cTP 10.83)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2238Detail       seedlings [A. thaliana] total tissue gfs9
2239Detail       seedlings [A. thaliana] total tissue gfs9
2240Detail       seedlings [A. thaliana] total tissue gfs9
2241Detail       seedlings [A. thaliana] total tissue gfs9
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2257Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
19525416(leaf (wt and clpr4-1 mutant))
20706207(cell cycle interactome (cell culture))

Comparative Proteomics Data


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