PPDB

The Plant Proteome Database

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AT5G19180.1   E1 C-terminal related 1

Lab Annot. ECR1 (E1 C-TERMINAL RELATED 1); small protein activating enzyme
Mapman: 29.5.11.2 protein.degradation.ubiquitin.E1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19180.2 11Arabidopsis thaliana036798980 (0)_
AT2G21470.1 11Arabidopsis thaliana9E-3820337582 (0)S
AT2G21470.3 11Arabidopsis thaliana1E-3720337582 (0)S
Os01g16540.1 7Oryza sativa044569806 (6)_
Os07g39780.3 7Oryza sativa5E-4120339594 (4)_
Os07g39780.2 7Oryza sativa7E-4020339595 (5)_
Zm00001eb332890_P002 agpv5Zea mays045268800 (0)_
GRMZM2G007915_P02 3.21Zea mays045268804 (4)_
GRMZM2G007915_P01 3.21Zea mays045263734 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: E2_bind(1) Sacchrp_dh_NADP(2) ThiF(1)
TargetP: Cytoplasm (Class 2 C0.123; M0.135; S0.047; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 454 aa (-cTP 443)
Molecular Weight 50.54 kDA(-cTP )
PI 5.46(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2245Detail       seedlings [A. thaliana] total tissue wild-type
2297Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


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