PPDB

PPDB	The Plant Proteome Database

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AT5G16860.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G18750.1 11 Arabidopsis thaliana 0 796 38 57 0 (0) C
AT1G11290.1 11 Arabidopsis thaliana 0 854 35 55 1 (1) C
AT3G22690.2 11 Arabidopsis thaliana 5E-179 870 35 53 0 (0) C
Os04g14130.3 7 Oryza sativa 0 859 53 69 0 (0) _
Os04g14130.2 7 Oryza sativa 0 859 53 69 0 (0) _
Os04g14130.1 7 Oryza sativa 0 859 53 69 0 (0) _
GRMZM2G123014_P01 3.21 Zea mays 0 877 52 69 0 (0) M
v1_GRMZM2G123014_P01 4a53 Zea mays 0 877 52 69 0 (0) M
Zm00001eb431340_P001 agpv5 Zea mays 0 595 52 66 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(4) DYW_deaminase(1) PPR(14) PPR_1(12) PPR_2(13) PPR_3(10) PPR_long(4) RPN7(
TargetP:	Cytoplasm (Class 5 C0.028; M0.369; S0.034; _0.411)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	4 TMs
TAT position:
Length	850 aa (-cTP 763)
Molecular Weight	94.64 kDA(-cTP )
PI	7.99(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data