PPDB

PPDB	The Plant Proteome Database

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AT5G13930.1 Chalcone and stilbene synthase family protein

Lab Annot.

Chalcone and stilbene synthase protein
Mapman: 16.8.2.1 secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase

Curated Location

TAIR curated location: endoplasmic reticulum & nucleus & vacuolar membrane (sensu Magnoliophyta)11489181,15817473

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G34850.1 11 Arabidopsis thaliana 9E-94 376 39 60 0 (0) _
AT4G00040.1 11 Arabidopsis thaliana 6E-93 381 40 59 0 (0) M
AT1G02050.1 11 Arabidopsis thaliana 4E-85 376 39 59 0 (0) M
Os11g32650.1 7 Oryza sativa 0 393 82 93 30 (30) _
Os07g11440.1 7 Oryza sativa 0 387 72 86 0 (0) _
Os10g07616.1 7 Oryza sativa 2E-137 395 50 68 0 (0) _
GRMZM2G422750_P03 3.21 Zea mays 0 394 84 93 20 (20) _
v1_GRMZM2G018724_P01 4a53 Zea mays 0 394 84 93 17 (17) _
v1_GRMZM2G151227_P01 4a53 Zea mays 0 394 82 93 3 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ACP_syn_III(1) ACP_syn_III_C(1) Chal_sti_synt_C(1) Chal_sti_synt_N(1) CinA(2) FA
TargetP:	Cytoplasm (Class 2 C0.128; M0.159; S0.110; _0.765)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	395 aa (-cTP 382)
Molecular Weight	43.12 kDA(-cTP )
PI	6.08(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1346	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 2)
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Silique)
19200160(flower-stage 12)
20118269(developing seeds)
17216043(leaf)
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)

Comparative Proteomics Data