PPDB

The Plant Proteome Database

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AT5G13800.1   pheophytinase

Lab Annot. pheophytin pheophorbide hydrolase (pheophytinase) (PPH) (also CRN1) recruited to PG
Mapman: 19.50* tetrapyrrole synthesis.tetrapyrrole degradation; 26.57* misc.alpha/beta-Hydrolase family
Curated Location plastoglobules (Pubmed: 23198870 19304936 22366162 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G13800.3 11Arabidopsis thaliana04841001000 (0)_
AT5G13800.2 11Arabidopsis thaliana04841001007 (7)C
AT5G13800.4 11Arabidopsis thaliana04021001000 (0)C
Os06g24730.1 7Oryza sativa044959752 (2)C
Os06g24730.3 7Oryza sativa2E-17338662752 (2)C
Os06g24730.2 7Oryza sativa2E-17238162762 (2)C
v1_GRMZM2G109070_P01 4a53Zea mays039265810 (0)C
Zm00001eb231810_P001 agpv5Zea mays039265810 (0)C
Zm00001eb231810_P002 agpv5Zea mays039265810 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Abhydrolase_1(2) Abhydrolase_2(2) Abhydrolase_5(1) Abhydrolase_6(1) DUF4127(1) E
TargetP: Chloroplast (Class 2 C0.878; M0.056; S0.054; _0.082)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 484 aa (-cTP 438)
Molecular Weight 54.57 kDA(-cTP 49.45)
PI 5.77(-cTP 5.25)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
487Detail       leaf [A. thaliana] chloroplast plastoglobulek2
872Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (1-8); k2k3 (9-10)
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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