PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G09550.1   GDP dissociation inhibitor family protein / Rab GTPase activator family protein

Lab Annot. GDP dissociation inhibitor protein / Rab GTPase activator protein
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G59920.1 11Arabidopsis thaliana0444778996 (55)_
AT2G44100.1 11Arabidopsis thaliana04447789102 (30)_
AT2G44100.2 11Arabidopsis thaliana04307689102 (30)_
Os05g34540.1 7Oryza sativa0444818919 (19)_
Os03g16900.1 7Oryza sativa043782900 (0)_
Os05g23860.1 7Oryza sativa0444808911 (11)_
GRMZM2G084440_P01 3.21Zea mays0444819016 (16)_
v1_GRMZM2G084440_P01 4a53Zea mays0444819028 (25)_
Zm00001eb349250_P002 agpv5Zea mays044480900 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Amino_oxidase(1) GDI(1)
TargetP: Cytoplasm (Class 3 C0.050; M0.073; S0.300; _0.813)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 445 aa (-cTP 383)
Molecular Weight 49.55 kDA(-cTP )
PI 5.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16247729(mature Pollen)
18436743(specific to flower)
19546170(mature pollen grains)
19508356(mature pollen grains and pollen tubes)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help