PPDB

 The Plant Proteome Database

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AT5G06420.1   Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
Lab Annot. Zinc finger (CCCH-type/C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G06420.2 11Arabidopsis thaliana03781001000 (0)_
AT1G01350.1 11Arabidopsis thaliana031996970 (0)_
AT4G01023.1 11Arabidopsis thaliana2E-265967840 (0)_
Os02g19804.1 7Oryza sativa3E-12831465760 (0)_
Zm00001eb204190_P001 agpv5Zea mays3E-12432561740 (0)_
GRMZM2G164359_P01 3.21Zea mays3E-12432561741 (1)_
v1_GRMZM2G373653_P01 4a53Zea mays5E-10230757694 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DTHCT(2) Prok-RING_4(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-C3HC4_4(1) zf
TargetP: Cytoplasm (Class 5 C0.460; M0.115; S0.051; _0.475)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 378 aa (-cTP 343)
Molecular Weight 42.46 kDA(-cTP )
PI 6.68(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 17432890(leaf total membranes)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help