PPDB

PPDB	The Plant Proteome Database

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AT5G03800.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Homolog of maize PPR103. PPR protein. EMB175
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 27095196 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G49170.1 11 Arabidopsis thaliana 2E-136 826 33 54 0 (0) C
AT5G16860.1 11 Arabidopsis thaliana 1E-135 816 31 49 0 (0) _
AT4G18750.1 11 Arabidopsis thaliana 4E-132 783 31 53 0 (0) C
Os07g07620.1 7 Oryza sativa 0 798 44 62 0 (0) C
Os04g14130.3 7 Oryza sativa 2E-141 810 32 51 0 (0) _
Os04g14130.2 7 Oryza sativa 2E-141 810 32 51 0 (0) _
Zm00001eb117060_P004 agpv5 Zea mays 0 798 42 62 0 (0) C
v1_GRMZM2G170896_P01 4a53 Zea mays 0 798 42 62 7 (7) C
GRMZM2G170896_P01 3.21 Zea mays 0 798 42 62 7 (7) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(1) PPR(15) PPR_1(11) PPR_2(13) PPR_3(6) PPR_long(5) RPN7(4)
TargetP:	Chloroplast (Class 1 C0.934; M0.050; S0.019; _0.102)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	896 aa (-cTP 838)
Molecular Weight	101.15 kDA(-cTP 94.72)
PI	6.66(-cTP 6.34)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data