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AT5G02250.1
Ribonuclease II/R family protein
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| Lab Annot. |
3'-5' exoribonuclease - RNR1 (this is not RIF10)
Mapman: 27.1.19 RNA.processing.ribonucleases |
| Curated Location |
plastid stroma (Pubmed: 23198870 15604703 15891117 18431481 )
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
NUC205(2) RNase_II_C_S1(2) RNB(1) |
| TargetP: |
Chloroplast (Class 2 C0.908; M0.123; S0.001; _0.044) |
| Predotar: |
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| Subcel. Location: |
Stroma |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
803 aa (-cTP 768) |
| Molecular Weight |
90.68 kDA(-cTP 86.84) |
| PI |
6.20(-cTP 5.79) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 303 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 342 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast low density membrane | wild-type |
| 451 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 869 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 877 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 1484 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 2) |
| 1941 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 2113 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wt |
| 2320 | Detail | | | | | | | | [A. thaliana] | Thylakoids plastoglobule | |
| 2321 | Detail | | | | | | | | leaf [A. thaliana] | | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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18431481(chloroplast)
19995723(chloroplast reference proteome)
21515685(GreenCut2)
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Comparative Proteomics Data
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