PPDB

The Plant Proteome Database

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AT4G37640.1   calcium ATPase 2

Lab Annot. calcium ATPase 2
Mapman: 30.3 signalling.calcium
Curated Location
TAIR curated location: endoplasmic reticulum membrane10823962
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G22950.1 11Arabidopsis thaliana0101592964 (4)_
AT1G27770.1 11Arabidopsis thaliana0101877874 (4)_
AT1G27770.4 11Arabidopsis thaliana0101877870 (0)_
Os03g10640.1 7Oryza sativa0101880880 (0)_
Os12g39660.1 7Oryza sativa01018778722 (22)_
Os03g42020.1 7Oryza sativa096770831 (1)C
GRMZM2G006977_P01 3.21Zea mays0101878880 (0)_
Zm00001eb007650_P001 agpv5Zea mays0101878880 (0)_
v1_GRMZM2G006977_P01 4a53Zea mays0101878880 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CaATP_NAI(1) Cation_ATPase(1) Cation_ATPase_C(3) Cation_ATPase_N(1) DAGK_cat(2)
TargetP: Cytoplasm (Class 2 C0.217; M0.035; S0.008; _0.917)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 10 TMs
TAT position:
Length 1014 aa (-cTP 963)
Molecular Weight 110.44 kDA(-cTP )
PI 5.50(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
337Detail       bundle sheaths [A. thaliana]Bundle sheath total BS strands wild-type
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
21173025(root proteome)
21988472(vacuole (unfiltered data))
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help