PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G29930.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G29930.7 11Arabidopsis thaliana7E-16922699990 (0)_
AT4G29930.3 11Arabidopsis thaliana7E-16922699990 (0)_
AT4G29930.6 11Arabidopsis thaliana8E-16525489890 (0)_
Os04g23550.1 7Oryza sativa2E-3120834590 (0)_
Os04g23440.1 7Oryza sativa7E-2319930530 (0)_
Os03g51580.1 7Oryza sativa2E-1718231500 (0)_
GRMZM2G042895_P01 3.21Zea mays1E-3726931560 (0)_
Zm00001eb415520_P001 agpv5Zea mays1E-3726931560 (0)_
v1_GRMZM2G042895_P01 4a53Zea mays1E-3726931560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ACT_6(1) HLH(1) PCRF(2)
TargetP: Cytoplasm (Class 3 C0.319; M0.061; S0.020; _0.795)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 254 aa (-cTP 197)
Molecular Weight 29.30 kDA(-cTP )
PI 4.76(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help