PPDB

The Plant Proteome Database

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AT4G27120.1   DDRGK domain protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G27120.2 11Arabidopsis thaliana02981001001 (1)S
AT4G27120.3 11Arabidopsis thaliana4E-1622251001000 (0)_
Os07g01320.1 7Oryza sativa1E-10028963730 (0)S
v1_GRMZM2G179429_P03 4a53Zea mays3E-9228662740 (0)S
GRMZM2G179429_P03 3.21Zea mays3E-9228662740 (0)S
GRMZM2G179429_P02 3.21Zea mays4E-9228662740 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DDRGK(1) DUF2561(1) EphA2_TM(1) FAM60A(1) FeoC(2) HTH_AsnC-type(1) HTH_PafC(1) M
TargetP: Secreted (Class 4 C0.180; M0.038; S0.402; _0.104)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 298 aa (-cTP 237)
Molecular Weight 34.02 kDA(-cTP )
PI 5.08(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1555Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help