PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G26550.1   Got1/Sft2-like vescicle transport protein family
Lab Annot. SFT2-like protein
Mapman: 29.3.4.2 protein.targeting.secretory pathway.golgi
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G56020.1 11Arabidopsis thaliana6E-13623085900 (0)_
AT5G56020.2 11Arabidopsis thaliana6E-13623085900 (0)_
AT4G26550.2 11Arabidopsis thaliana4E-1101601001000 (0)_
Os06g19620.1 7Oryza sativa3E-10522470800 (0)C
Os06g40630.1 7Oryza sativa4E-9423067750 (0)C
Os06g19620.2 7Oryza sativa6E-7415569800 (0)C
v1_GRMZM2G345493_P02 4a53Zea mays4E-10920275860 (0)C
v1_GRMZM2G345493_P01 4a53Zea mays4E-10920275860 (0)C
GRMZM5G817035_P01 3.21Zea mays4E-10920275860 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF2207(1) Got1(1) SLATT_6(1) Vma12(2)
TargetP: Cytoplasm (Class 5 C0.438; M0.097; S0.050; _0.473)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 225 aa (-cTP 172)
Molecular Weight 24.14 kDA(-cTP )
PI 8.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help