PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G22165.1   F-box protein (DUF295)

Lab Annot. F-box protein with a domain of unknown function (DUF295)
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G22660.1 11Arabidopsis thaliana7E-14140157690 (0)_
AT4G22180.1 11Arabidopsis thaliana3E-14040256680 (0)C
AT4G22170.1 11Arabidopsis thaliana2E-13037955670 (0)_
Os11g37060.1 7Oryza sativa8E-1241223390 (0)_
Os11g37390.1 7Oryza sativa6E-0935920400 (0)_
Os03g58764.1 7Oryza sativa9E-0941622360 (0)C
Zm00001eb049420_P001 agpv5Zea mays2E-1039323410 (0)M
Zm00001eb049440_P001 agpv5Zea mays6E-1038823400 (0)S
GRMZM2G007327_P01 3.21Zea mays1E-0939723400 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF295(1) F-box(1)
TargetP: Cytoplasm (Class 4 C0.188; M0.155; S0.085; _0.493)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 363 aa (-cTP 327)
Molecular Weight 42.38 kDA(-cTP )
PI 8.60(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help