PPDB

The Plant Proteome Database

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AT4G17350.1   auxin canalization protein (DUF828)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47440.1 11Arabidopsis thaliana040479850 (0)_
AT4G16670.1 11Arabidopsis thaliana1E-10237550660 (0)_
AT4G16670.2 11Arabidopsis thaliana2E-7829552670 (0)_
Os02g44040.1 7Oryza sativa1E-7436944600 (0)M
Os10g41060.1 7Oryza sativa4E-7337345610 (0)_
Os03g43510.1 7Oryza sativa3E-3024838540 (0)_
Zm00001eb186550_P001 agpv5Zea mays9E-6737145600 (0)_
v1_GRMZM2G027052_P01 4a53Zea mays9E-6737145601 (1)_
Zm00001eb391240_P003 agpv5Zea mays1E-6542141580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Auxin_canalis(2) PH_2(1)
TargetP: Cytoplasm (Class 2 C0.126; M0.059; S0.045; _0.903)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 405 aa (-cTP 392)
Molecular Weight 44.53 kDA(-cTP )
PI 9.10(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help