PPDB

The Plant Proteome Database

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AT4G03190.1   GRR1-like protein 1

Lab Annot. GRH1 (GRR1-LIKE PROTEIN 1); ubiquitin-protein ligase
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
TAIR curated location: nucleus15992545
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G62980.1 11Arabidopsis thaliana057570830 (0)_
AT1G12820.1 11Arabidopsis thaliana057155730 (0)_
AT3G26810.1 11Arabidopsis thaliana057355730 (0)_
Os04g32460.2 7Oryza sativa057057720 (0)_
Os04g32460.1 7Oryza sativa057057720 (0)_
Os05g05800.1 7Oryza sativa056160740 (0)_
GRMZM2G135978_P01 3.21Zea mays056860740 (0)_
v1_GRMZM2G135978_P01 4a53Zea mays056860740 (0)_
Zm00001eb354200_P001 agpv5Zea mays056860740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(2) F-box-like(2) F-box_5(1) LPD37(1) LRR_1(2) LRR_3(1) LRR_4(4) LRR_6(6) T
TargetP: Cytoplasm (Class 5 C0.476; M0.032; S0.056; _0.628)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 585 aa (-cTP 532)
Molecular Weight 65.65 kDA(-cTP )
PI 8.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2287Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


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