PPDB

The Plant Proteome Database

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AT3G59060.1   phytochrome interacting factor 3-like 6

Lab Annot. PIF5 - phytochrome-interacting factor 5
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G59060.2 11Arabidopsis thaliana044499990 (0)_
AT3G59060.3 11Arabidopsis thaliana044499990 (0)_
AT3G59060.4 11Arabidopsis thaliana044499990 (0)_
Os12g41650.3 7Oryza sativa2E-4738934460 (0)_
Os12g41650.2 7Oryza sativa2E-4738934460 (0)_
Os03g56950.7 7Oryza sativa2E-4742433460 (0)_
Zm00001eb059460_P004 agpv5Zea mays4E-5141434470 (0)C
Zm00001eb059460_P005 agpv5Zea mays8E-5139134470 (0)_
GRMZM2G065374_P01 3.21Zea mays1E-5041433470 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1) Tom22(1)
TargetP: Cytoplasm (Class 3 C0.334; M0.087; S0.044; _0.813)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 442 aa (-cTP 426)
Molecular Weight 49.04 kDA(-cTP )
PI 5.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help