PPDB

The Plant Proteome Database

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AT3G57990.1   hypothetical protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os09g31458.1 7Oryza sativa2E-5632038510 (0)_
Os08g39990.1 7Oryza sativa1E-4932636512 (2)_
Os04g48600.1 7Oryza sativa4E-105950620 (0)M
v1_GRMZM2G129405_P01 4a53Zea mays3E-5530038550 (0)_
GRMZM2G129405_P01 3.21Zea mays3E-5530038550 (0)_
GRMZM2G103713_P01 3.21Zea mays1E-5030538534 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Syntaxin-6_N(2)
TargetP: Cytoplasm (Class 5 C0.085; M0.223; S0.024; _0.337)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 367 aa (-cTP 365)
Molecular Weight 39.89 kDA(-cTP )
PI 9.42(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help