PPDB

PPDB	The Plant Proteome Database

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AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

OTP84 - PPR protein - editing ndhF, psbZ, ndhB
Mapman: 27.1.5* RNA.processing.editing

Curated Location

plastid (Pubmed: 23198870 19934379 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G11290.1 11 Arabidopsis thaliana 0 801 40 60 1 (1) C
AT4G18750.1 11 Arabidopsis thaliana 0 797 37 59 0 (0) C
AT3G63370.1 11 Arabidopsis thaliana 0 835 37 58 0 (0) C
Os04g02850.1 7 Oryza sativa 0 807 53 69 0 (0) C
Os01g25270.1 7 Oryza sativa 0 828 39 59 0 (0) M
Os09g07780.1 7 Oryza sativa 0 828 38 58 0 (0) M
Zm00001eb424590_P001 agpv5 Zea mays 0 832 36 58 0 (0) C
AC203841.3_FGP002 3.21 Zea mays 0 838 36 58 0 (0) C
v1_AC203841.3_FGP002 4a53 Zea mays 0 838 36 58 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(2) PPR(14) PPR_1(10) PPR_2(14) PPR_3(8) PPR_long(5) TPR_17(1) TPR_
TargetP:	Chloroplast (Class 2 C0.852; M0.110; S0.159; _0.013)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	890 aa (-cTP 846)
Molecular Weight	99.27 kDA(-cTP 94.34)
PI	6.94(-cTP 6.80)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data