PPDB

The Plant Proteome Database

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AT3G54820.1   plasma membrane intrinsic protein 2%3B5

Lab Annot. plasma membrane intrinsic protein 2;5
Mapman: 34.19.1 transport.Major Intrinsic Proteins.PIP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G37170.2 11Arabidopsis thaliana3E-16628678870 (0)S
AT2G37170.1 11Arabidopsis thaliana7E-166286788736 (36)_
AT2G39010.1 11Arabidopsis thaliana1E-165285788596 (95)_
Os07g26690.1 7Oryza sativa3E-1642828088206 (206)_
Os02g41860.2 7Oryza sativa5E-1612757987128 (128)_
Os04g44060.1 7Oryza sativa9E-157273798722 (22)_
Zm00001eb306380_P001 agpv5Zea mays1E-16327582890 (0)_
GRMZM2G014914_P01 3.21Zea mays1E-1632758289161 (148)_
v1_GRMZM2G014914_P01 4a53Zea mays1E-1632758289163 (163)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3611(2) DUF5368(2) MIP(1)
TargetP: Cytoplasm (Class 2 C0.020; M0.079; S0.232; _0.974)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 6 TMs
TAT position:
Length 286 aa (-cTP 276)
Molecular Weight 30.59 kDA(-cTP )
PI 8.99(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19106119(plasma membrane detergent resistent microdomains (DRM))
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help