PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G54160.1   RNI-like superfamily protein

Lab Annot.
Mapman: 31.4 cell.vesicle transport
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G62430.1 11Arabidopsis thaliana2E-17241565770 (0)_
AT5G15620.1 11Arabidopsis thaliana1E-15742060730 (0)_
AT3G62440.1 11Arabidopsis thaliana3E-11143145630 (0)_
Os02g09580.1 7Oryza sativa1E-0733925430 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FBD(4) LRR_2(4)
TargetP: Chloroplast (Class 4 C0.389; M0.035; S0.144; _0.165)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 434 aa (-cTP 395)
Molecular Weight 49.88 kDA(-cTP 45.56)
PI 5.41(-cTP 5.25)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help