PPDB

PPDB	The Plant Proteome Database

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AT3G49590.1 Autophagy-related protein 13

Lab Annot.

ATG13a - (ATG1/13 kinase complex)
Mapman: 29.5.2 protein.degradation.autophagy

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G49590.2 11 Arabidopsis thaliana 0 603 100 100 0 (0) _
AT3G49590.3 11 Arabidopsis thaliana 0 618 96 97 0 (0) _
AT3G18770.1 11 Arabidopsis thaliana 3E-39 311 36 52 0 (0) C
Os04g45570.2 7 Oryza sativa 3E-56 598 31 44 0 (0) _
Os04g45570.1 7 Oryza sativa 3E-55 598 31 44 0 (0) _
Os02g43040.1 7 Oryza sativa 4E-55 462 39 50 0 (0) _
Zm00001eb248750_P001 agpv5 Zea mays 5E-56 593 34 46 0 (0) C
v1_GRMZM2G109348_P01 4a53 Zea mays 5E-56 593 34 46 0 (0) C
GRMZM2G109348_P01 3.21 Zea mays 5E-56 593 34 46 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATG13(1) S6OS1(1)
TargetP:	Cytoplasm (Class 4 C0.427; M0.079; S0.018; _0.634)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	603 aa (-cTP 540)
Molecular Weight	66.56 kDA(-cTP )
PI	9.13(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data