PPDB

 The Plant Proteome Database

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AT3G47340.1   glutamine-dependent asparagine synthase 1
Lab Annot. glutamine-dependent asparagine synthase 1 (ASN1) (DARK INDUCIBLE 6)
Mapman: 13.1.3.1.1 amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G47340.2 11Arabidopsis thaliana050810010019 (17)_
AT5G65010.1 11Arabidopsis thaliana05517991358 (258)_
AT5G10240.1 11Arabidopsis thaliana055479904 (4)_
Os06g15420.1 7Oryza sativa0555799050 (50)C
Os03g18130.1 7Oryza sativa054573840 (0)M
Os03g18130.4 7Oryza sativa052072840 (0)M
Zm00001eb163240_P002 agpv5Zea mays058176870 (0)C
GRMZM2G093175_P02 3.21Zea mays058176870 (0)C
v1_GRMZM2G093175_P02 4a53Zea mays058176870 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Asn_synthase(2) DUF3700(1) GATase_6(1) GATase_7(1) NAD_synthase(1)
TargetP: Cytoplasm (Class 5 C0.429; M0.249; S0.058; _0.440)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 584 aa (-cTP 564)
Molecular Weight 65.62 kDA(-cTP )
PI 6.17(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2246Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help