PPDB

The Plant Proteome Database

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AT3G45310.1   Cysteine proteinases superfamily protein

Lab Annot. papain-like cysteine protease (ALP2)
Mapman: 29.5.3.1.1* protein.degradation.cysteine protease.CA.C1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G45310.2 11Arabidopsis thaliana0358999911 (11)S
AT5G60360.1 11Arabidopsis thaliana0335869445 (39)S
AT5G60360.2 11Arabidopsis thaliana0335859345 (39)S
Os09g27030.2 7Oryza sativa033670861 (1)S
Os04g13090.1 7Oryza sativa2E-6632040530 (0)S
Os11g14900.4 7Oryza sativa9E-6630141570 (0)S
GRMZM2G038636_P01 3.21Zea mays033772832 (2)S
v1_GRMZM2G038636_P01 4a53Zea mays033772835 (5)S
Zm00001eb314220_P001 agpv5Zea mays1E-17333769790 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Inhibitor_I29(1) Peptidase_C1(2) Peptidase_C1_2(2)
TargetP: Secreted (Class 1 C0.041; M0.017; S0.984; _0.075)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 358 aa (-cTP 267)
Molecular Weight 39.54 kDA(-cTP )
PI 6.22(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
22060019(phosphoproteome - N-starved seedlings)
21693672(wound-regulated leaf proteome (AOS mutant))
21173025(root proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help