PPDB

 The Plant Proteome Database

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AT3G27770.1   plant/protein
Lab Annot. Putative membrane protein
Mapman: 35.2 not assigned.unknown
Curated Location vacuole-tonoplast (Pubmed: 21988472 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27770.2 11Arabidopsis thaliana025797980 (0)_
AT5G62960.1 11Arabidopsis thaliana4E-8731542600 (0)_
AT1G10660.4 11Arabidopsis thaliana5E-8631442640 (0)S
Os01g07700.1 7Oryza sativa3E-9032542630 (0)S
Os01g07700.3 7Oryza sativa3E-9032542630 (0)S
Os01g07700.2 7Oryza sativa3E-9032542630 (0)S
Zm00001eb122910_P004 agpv5Zea mays3E-9233043620 (0)S
Zm00001eb122910_P002 agpv5Zea mays3E-9233043620 (0)S
Zm00001eb122910_P001 agpv5Zea mays3E-9233043620 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM:
TargetP: Secreted (Class 4 C0.001; M0.222; S0.870; _0.657)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 7 TMs
TAT position:
Length 315 aa (-cTP 281)
Molecular Weight 36.71 kDA(-cTP )
PI 6.94(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to roots)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help