PPDB

The Plant Proteome Database

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AT3G22690.1   LOW protein: PPR containing-like protein

Lab Annot. YS1 - DYW and PPR protein - editing rpoB
Mapman: 27.1.5* RNA.processing.editing
Curated Location plastid (Pubmed: 23198870 19934379 19054358 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22690.2 11Arabidopsis thaliana08411001000 (0)C
AT3G22690.3 11Arabidopsis thaliana084196960 (0)C
AT2G29760.1 11Arabidopsis thaliana1E-17969037601 (0)C
Os01g25270.1 7Oryza sativa9E-16679035540 (0)M
Os03g27880.1 7Oryza sativa7E-16571337570 (0)M
Os09g07780.1 7Oryza sativa1E-16380834530 (0)M
v1_GRMZM2G340279_P01 4a53Zea mays1E-16371637560 (0)_
GRMZM2G340279_P01 3.21Zea mays1E-16371637560 (0)_
Zm00001eb019320_P001 agpv5Zea mays1E-16371637560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_lid_7(3) DUF1685(2) DYW_deaminase(1) PPR(16) PPR_1(13) PPR_2(14) PPR_3(12) P
TargetP: Chloroplast (Class 3 C0.603; M0.064; S0.063; _0.126)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 938 aa (-cTP 908)
Molecular Weight 104.22 kDA(-cTP 101.04)
PI 5.81(-cTP 5.67)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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