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PPDB	The Plant Proteome Database

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AT3G22270.1 Topoisomerase II-associated protein PAT1

Lab Annot.

Topoisomerase II-associated protein PAT1
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G14990.1 11 Arabidopsis thaliana 0 801 79 85 0 (0) _
AT4G14990.2 11 Arabidopsis thaliana 0 722 79 85 0 (0) _
AT1G79090.2 11 Arabidopsis thaliana 2E-177 790 42 58 21 (9) _
Os02g31220.2 7 Oryza sativa 0 804 49 64 0 (0) _
Os02g31220.1 7 Oryza sativa 0 804 49 64 0 (0) _
Os01g56300.1 7 Oryza sativa 0 800 48 64 0 (0) _
GRMZM2G101760_P01 3.21 Zea mays 0 796 49 64 0 (0) _
v1_GRMZM2G101760_P01 4a53 Zea mays 0 796 49 64 0 (0) _
Zm00001eb152050_P001 agpv5 Zea mays 0 796 49 64 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	bVLRF1(1) DUF87(1)
TargetP:	Cytoplasm (Class 3 C0.043; M0.295; S0.131; _0.747)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	782 aa (-cTP 768)
Molecular Weight	85.65 kDA(-cTP )
PI	7.23(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
738	Detail								[A. thaliana]
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data