PPDB

The Plant Proteome Database

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AT3G15930.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G29760.1 11Arabidopsis thaliana7E-16063137621 (0)C
AT2G22410.1 11Arabidopsis thaliana1E-14861337582 (2)M
AT1G08070.1 11Arabidopsis thaliana2E-13872634530 (0)C
Os01g08120.1 7Oryza sativa3E-17454448650 (0)M
Os10g26070.1 7Oryza sativa8E-14458438590 (0)M
Os01g60000.1 7Oryza sativa1E-13656535610 (0)M
v1_GRMZM2G175253_P01 4a53Zea mays057646640 (0)M
GRMZM2G175253_P01 3.21Zea mays057646640 (0)M
Zm00001eb336860_P001 agpv5Zea mays1E-17956446640 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DED(1) DUF3213(1) DYW_deaminase(1) PPR(10) PPR_1(11) PPR_2(10) PPR_3(9) PPR_long
TargetP: Cytoplasm (Class 5 C0.075; M0.218; S0.194; _0.416)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 687 aa (-cTP 585)
Molecular Weight 77.68 kDA(-cTP )
PI 8.35(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help