PPDB

PPDB	The Plant Proteome Database

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AT3G08820.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G08070.1 11 Arabidopsis thaliana 3E-174 697 39 59 0 (0) C
AT3G12770.1 11 Arabidopsis thaliana 2E-171 670 37 60 0 (0) _
AT4G18750.1 11 Arabidopsis thaliana 1E-170 662 39 61 0 (0) C
Os11g01836.1 7 Oryza sativa 0 575 52 70 0 (0) M
Os12g01850.1 7 Oryza sativa 0 589 51 70 0 (0) M
Os01g25270.1 7 Oryza sativa 1E-155 667 36 57 0 (0) M
Zm00001eb276220_P003 agpv5 Zea mays 0 577 52 70 0 (0) M
Zm00001eb276220_P001 agpv5 Zea mays 0 577 52 70 0 (0) M
Zm00001eb276220_P004 agpv5 Zea mays 0 577 52 70 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Coatomer_E(3) DYW_deaminase(2) PPR(13) PPR_1(10) PPR_2(9) PPR_3(9) PPR_long(3) R
TargetP:	Cytoplasm (Class 3 C0.035; M0.194; S0.062; _0.702)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	685 aa (-cTP 626)
Molecular Weight	77.33 kDA(-cTP )
PI	6.95(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data