PPDB

The Plant Proteome Database

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AT3G04720.1   pathogenesis-related 4

Lab Annot. hevein-like protein (HEL)
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G12500.1 11Arabidopsis thaliana2E-0641536528 (17)S
Os11g37950.1 7Oryza sativa1E-6212673840 (0)S
Os11g37970.1 7Oryza sativa9E-6111873830 (0)S
Os11g37960.1 7Oryza sativa1E-6012671800 (0)S
Zm00001eb167690_P005 agpv5Zea mays4E-6011873830 (0)S
v1_GRMZM2G117989_P05 4a53Zea mays4E-6011873830 (0)S
v1_GRMZM2G117989_P03 4a53Zea mays4E-6011873830 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Barwin(1) Chitin_bind_1(2) DPBB_1(1) ISG65-75(1)
TargetP: Secreted (Class 3 C0.018; M0.259; S0.760; _0.057)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 212 aa (-cTP 174)
Molecular Weight 22.94 kDA(-cTP )
PI 7.89(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

17916636(root (NaCl stress))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)

Comparative Proteomics Data


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