PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G04560.1   nucleolar/coiled-body phosphoprotein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os02g57500.1 7Oryza sativa2E-14037556700 (0)C
Zm00001eb259140_P002 agpv5Zea mays5E-13038656680 (0)_
v1_GRMZM2G087924_P01 4a53Zea mays5E-13038656681 (1)_
GRMZM2G087924_P02 3.21Zea mays5E-13038656681 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 4 C0.721; M0.033; S0.015; _0.451)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 417 aa (-cTP 352)
Molecular Weight 45.88 kDA(-cTP 39.02)
PI 6.52(-cTP 6.91)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17293592(total seedlings û light and dark grown)
17660356(tonoplast (Brassica oleracea buds))
21768351(Leaf-Phosphoproteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help