PPDB

 The Plant Proteome Database

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AT2G45350.1   Pentatricopeptide repeat (PPR) superfamily protein
Lab Annot. CRR4 - PPR protein - editing ndhD
Mapman: 27.1.5* RNA.processing.editing
Curated Location plastid stroma (Pubmed: 23198870 15662426 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G02750.1 11Arabidopsis thaliana5E-11944543610 (0)M
AT2G29760.1 11Arabidopsis thaliana1E-11859734541 (0)C
AT2G44880.6 11Arabidopsis thaliana7E-11457534560 (0)M
Os08g39130.1 7Oryza sativa1E-11956336570 (0)_
Os09g15800.1 7Oryza sativa1E-11755236570 (0)M
Os10g26070.1 7Oryza sativa2E-11453438560 (0)M
v1_GRMZM2G115152_P01 4a53Zea mays6E-12459636540 (0)M
GRMZM2G115152_P01 3.21Zea mays6E-12459636540 (0)M
Zm00001eb143560_P001 agpv5Zea mays6E-12459636540 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF538(3) PPR(15) PPR_1(9) PPR_2(13) PPR_3(8) PPR_long(3)
TargetP: Cytoplasm (Class 4 C0.251; M0.034; S0.076; _0.648)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 613 aa (-cTP 561)
Molecular Weight 69.19 kDA(-cTP )
PI 6.78(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 14760709(Vacuolar proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help