PPDB

PPDB	The Plant Proteome Database

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AT2G43410.1 RNA binding protein

Lab Annot.

RNA binding
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G43410.6 11 Arabidopsis thaliana 0 858 100 100 0 (0) _
AT2G43410.2 11 Arabidopsis thaliana 0 901 95 95 0 (0) _
AT2G43410.3 11 Arabidopsis thaliana 0 901 95 95 0 (0) _
Os09g34070.2 7 Oryza sativa 5E-127 746 37 53 0 (0) _
Os09g34070.1 7 Oryza sativa 5E-127 746 37 53 0 (0) _
Os09g12730.2 7 Oryza sativa 4E-34 121 52 68 0 (0) M
GRMZM2G070038_P02 3.21 Zea mays 4E-132 904 35 50 0 (0) C
Zm00001eb318720_P002 agpv5 Zea mays 4E-132 904 35 50 0 (0) C
Zm00001eb318720_P001 agpv5 Zea mays 4E-132 904 35 50 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3724(1) Nup35_RRM_2(3) RRM_1(3) RRM_3(3) RRM_5(3) RRM_7(2) RRM_occluded(3) SP
TargetP:	Cytoplasm (Class 2 C0.124; M0.070; S0.103; _0.861)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	858 aa (-cTP 831)
Molecular Weight	94.90 kDA(-cTP )
PI	6.20(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data