PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G43050.1   Plant invertase/pectin methylesterase inhibitor superfamily

Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G59010.1 11Arabidopsis thaliana0498708128 (2)S
AT3G49220.1 11Arabidopsis thaliana2E-13549146611 (1)C
AT3G49220.3 11Arabidopsis thaliana6E-13549146610 (0)_
Os02g54190.1 7Oryza sativa3E-14548848610 (0)M
Os08g34900.1 7Oryza sativa8E-12846744590 (0)S
Os01g13320.1 7Oryza sativa8E-12547545590 (0)_
Zm00001eb112510_P001 agpv5Zea mays4E-14549249650 (0)S
v1_GRMZM2G158240_P01 4a53Zea mays1E-14449249651 (1)M
GRMZM2G158240_P01 3.21Zea mays1E-14449249651 (1)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DRIM(1) PDEase_I_N(1) Pectate_lyase_3(1) Pectinesterase(1) PMEI(1)
TargetP: Secreted (Class 5 C0.297; M0.007; S0.306; _0.012)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 518 aa (-cTP 463)
Molecular Weight 56.59 kDA(-cTP )
PI 8.85(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help