PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G41770.1   transmembrane protein%2C putative (DUF288)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G57420.1 11Arabidopsis thaliana077286930 (0)_
Os05g32500.1 7Oryza sativa0787597430 (30)_
Os05g32500.2 7Oryza sativa0630627610 (10)_
Os07g46300.1 7Oryza sativa071053720 (0)S
GRMZM2G109352_P01 3.21Zea mays0783607512 (12)C
Zm00001eb287230_P002 agpv5Zea mays078360750 (0)C
v1_GRMZM2G109352_P01 4a53Zea mays078360758 (8)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: STELLO(2)
TargetP: Cytoplasm (Class 5 C0.162; M0.204; S0.010; _0.403)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 771 aa (-cTP 740)
Molecular Weight 88.06 kDA(-cTP )
PI 6.23(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help