PPDB

PPDB	The Plant Proteome Database

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AT2G28830.1 armadillo/beta-catenin repeat protein

Lab Annot.

PLANT U-BOX 12
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G46510.1 11 Arabidopsis thaliana 0 567 65 79 5 (3) _
AT3G54850.1 11 Arabidopsis thaliana 2E-168 541 52 70 0 (0) _
AT1G71020.1 11 Arabidopsis thaliana 3E-140 553 45 63 0 (0) _
Os03g16824.1 7 Oryza sativa 0 548 60 79 0 (0) _
Os12g38210.2 6 Oryza sativa 0 541 61 76 0 (0) S
Os12g38210.1 7 Oryza sativa 0 541 61 76 0 (0) S
v1_GRMZM2G448603_P01 4a53 Zea mays 0 554 60 75 0 (0) M
Zm00001eb136450_P002 agpv5 Zea mays 0 554 60 75 0 (0) _
Zm00001eb012430_P001 agpv5 Zea mays 0 550 60 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arm(5) Arm_2(2) HEAT_2(3) HTH_Tnp_IS1(1) KAP(1) Neurochondrin(2) U-box(1) zf-C3H
TargetP:	Secreted (Class 2 C0.015; M0.149; S0.849; _0.119)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	582 aa (-cTP 574)
Molecular Weight	64.05 kDA(-cTP )
PI	5.52(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1628	Detail								Rosettes [A. thaliana]	total leaf tissue thylakoid + envelope	k1xk3
1872	Detail								Total leaf [A. thaliana]	Stroma	wild-type
2182	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data