PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G27120.1   DNA polymerase epsilon catalytic subunit
Lab Annot. DNA polymerase epsilon catalytic subunit
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G27120.2 11Arabidopsis thaliana0214199990 (0)_
AT2G27120.3 11Arabidopsis thaliana0213999990 (0)_
AT1G08260.1 11Arabidopsis thaliana0213985910 (0)_
Os02g30800.1 7Oryza sativa0225562740 (0)_
Zm00001eb241860_P001 agpv5Zea mays0217964770 (0)M
Zm00001eb241860_P002 agpv5Zea mays0217964770 (0)M
v1_GRMZM2G011631_P03 4a53Zea mays0134455693 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DNA_pol_B(4) DNA_pol_B_exo1(2) DNA_pol_B_exo2(1) DUF1744(1) RNase_H_2(2) zf-DNA_
TargetP: Cytoplasm (Class 5 C0.044; M0.492; S0.054; _0.617)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 2138 aa (-cTP 2055)
Molecular Weight 244.99 kDA(-cTP )
PI 6.49(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help