PPDB

The Plant Proteome Database

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AT1G79950.1   RAD3-like DNA-binding helicase protein

Lab Annot. helicase-related
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G79950.6 11Arabidopsis thaliana0104098980 (0)M
AT1G79950.5 11Arabidopsis thaliana08061001000 (0)M
AT1G79950.4 11Arabidopsis thaliana08061001000 (0)M
Os01g40980.1 7Oryza sativa0104148630 (0)_
Os01g40980.2 7Oryza sativa071858720 (0)_
Os09g37920.1 7Oryza sativa8E-11082432490 (0)_
GRMZM2G154839_P02 3.21Zea mays061957720 (0)_
Zm00001eb161030_P001 agpv5Zea mays0103948640 (0)_
v1_GRMZM2G154839_P01 4a53Zea mays082254700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CCM2_C(1) DEAD(2) DEAD_2(1) Helicase_C_2(1) PAH(1) ResIII(2) SNF2_N(1)
TargetP: Mitochondria (Class 5 C0.151; M0.586; S0.026; _0.422)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1040 aa (-cTP 1003)
Molecular Weight 116.63 kDA(-cTP )
PI 8.99(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
18463617(suspension cells-phosphorylated proteins)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help