PPDB

The Plant Proteome Database

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AT1G79460.1   Terpenoid cyclases/Protein prenyltransferases superfamily protein

Lab Annot. GA2 (GA REQUIRING 2); ent-kaurene synthase
Mapman: 17.6.1.2 hormone metabolism.gibberelin.synthesis-degradation.ent-kaurene synthase
Curated Location
TAIR curated location: chloroplast & chloroplast stroma & plastid9536043,11722763
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G61120.1 11Arabidopsis thaliana4E-9777329510 (0)_
AT4G02780.1 11Arabidopsis thaliana3E-8752434537 (7)C
AT4G16730.2 11Arabidopsis thaliana5E-4351727470 (0)_
Os04g52230.1 7Oryza sativa074948670 (0)M
Os02g36140.2 7Oryza sativa074544630 (0)C
Os04g10060.1 7Oryza sativa078243620 (0)C
Zm00001eb071070_P001 agpv5Zea mays077346650 (0)C
AC214360.3_FGP001 3.21Zea mays075144620 (0)M
GRMZM2G016922_P01 3.21Zea mays074642610 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Prenyltrans(1) SQHop_cyclase_C(2) SQHop_cyclase_N(1) Terpene_syn_C_2(1) Terpene_
TargetP: Chloroplast (Class 3 C0.655; M0.142; S0.067; _0.122)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 785 aa (-cTP 756)
Molecular Weight 89.62 kDA(-cTP 86.44)
PI 5.65(-cTP 5.59)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
869Detail       leaf [A. thaliana] chloroplast stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19995723(chloroplast reference proteome)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help