PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G78610.1 mechanosensitive channel of small conductance-like 6

Lab Annot.

mechanosensitive ion channel domain-containing protein
Mapman: 35.1 not assigned.no ontology

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G53470.1 11 Arabidopsis thaliana 0 916 57 72 0 (0) _
AT3G14810.1 11 Arabidopsis thaliana 0 898 59 73 0 (0) _
AT3G14810.2 11 Arabidopsis thaliana 0 898 56 70 0 (0) _
Os02g44770.1 7 Oryza sativa 0 813 53 70 0 (0) M
Os04g47320.1 7 Oryza sativa 0 822 50 68 0 (0) _
Os06g10410.1 7 Oryza sativa 3E-163 586 46 65 0 (0) _
GRMZM2G005996_P01 3.21 Zea mays 0 949 47 63 0 (0) C
v1_GRMZM2G005996_P01 4a53 Zea mays 0 949 47 63 0 (0) C
Zm00001eb429250_P001 agpv5 Zea mays 0 926 45 62 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1869(2) DUF4175(1) MS_channel(1) TMEM208_SND2(2)
TargetP:	Cytoplasm (Class 2 C0.116; M0.125; S0.142; _0.893)
Predotar:
Subcel. Location:
TM-HMM prediction:	6 TMs
Aramemnon:	7 TMs
TAT position:
Length	856 aa (-cTP 830)
Molecular Weight	96.60 kDA(-cTP )
PI	8.73(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
17151019(vacuole - suspension cell)
21533090(plasmodesmata-crude)
21768351(Leaf-Phosphoproteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data