PPDB

The Plant Proteome Database

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AT1G63290.1   Aldolase-type TIM barrel family protein

Lab Annot. ribulose-phosphate 3-epimerase, cytosolic, putative
Mapman: 7.2.3 OPP.non-reductive PP.ribulose-phosphate 3-epimerase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G01850.2 11Arabidopsis thaliana2E-15622492952 (0)S
AT3G01850.1 11Arabidopsis thaliana2E-15622492952 (0)S
AT3G01850.4 11Arabidopsis thaliana3E-12819389930 (0)_
Os09g32810.1 6Oryza sativa4E-136218819214 (14)S
Os09g32810.2 7Oryza sativa8E-11018280916 (6)_
Os03g07300.1 7Oryza sativa1E-46218415945 (45)C
GRMZM2G083102_P02 3.21Zea mays7E-133218799033 (33)S
Zm00001eb317710_P001 agpv5Zea mays7E-13321879900 (0)S
v1_GRMZM2G083102_P02 4a53Zea mays7E-133218799029 (29)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: OMPdecase(2) PG_binding_3(1) Ribul_P_3_epim(1)
TargetP: Secreted (Class 4 C0.059; M0.074; S0.636; _0.374)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 227 aa (-cTP 206)
Molecular Weight 24.11 kDA(-cTP )
PI 5.72(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

15060130(Plasma Membrane proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21693672(wound-regulated leaf proteome (AOS mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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