PPDB

PPDB	The Plant Proteome Database

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AT1G62590.1 pentatricopeptide (PPR) repeat-containing protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G62590.2 11 Arabidopsis thaliana 0 634 100 100 0 (0) M
AT1G63330.1 11 Arabidopsis thaliana 0 559 97 98 0 (0) _
AT1G63330.3 11 Arabidopsis thaliana 0 559 97 98 0 (0) _
Os10g35240.1 7 Oryza sativa 3E-109 560 32 56 0 (0) M
Os10g35240.2 7 Oryza sativa 3E-109 560 32 56 0 (0) M
Os10g35436.1 7 Oryza sativa 5E-109 592 31 55 0 (0) M
Zm00001eb244190_P001 agpv5 Zea mays 2E-101 513 33 56 0 (0) C
v1_GRMZM2G431850_P01 4a53 Zea mays 4E-101 575 30 54 0 (0) M
GRMZM2G431850_P01 3.21 Zea mays 4E-101 575 30 54 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(4) APAF1_C(2) ATP13(5) Clathrin(2) DED(2) DUF1421(1) DUF3863(2) ECSIT(5) MN
TargetP:	Mitochondria (Class 5 C0.355; M0.534; S0.063; _0.127)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	634 aa (-cTP 597)
Molecular Weight	70.86 kDA(-cTP )
PI	7.97(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data