PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G58100.1   TCP family transcription factor

Lab Annot.
Mapman: 27.3.29 RNA.regulation of transcription.TCP transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G58100.2 11Arabidopsis thaliana040194940 (0)_
AT1G35560.1 11Arabidopsis thaliana9E-5422049580 (0)C
AT1G72010.1 11Arabidopsis thaliana3E-5125544600 (0)C
Os12g07480.1 7Oryza sativa2E-5632543530 (0)_
Os11g07460.1 7Oryza sativa4E-4721948570 (0)_
Os06g12230.1 7Oryza sativa1E-388181920 (0)_
GRMZM2G089638_P01 3.21Zea mays1E-6131345570 (0)_
v1_GRMZM2G089638_P01 4a53Zea mays1E-6131345571 (1)_
GRMZM2G093895_P01 3.21Zea mays1E-4931541500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: TCP(2)
TargetP: Cytoplasm (Class 3 C0.216; M0.141; S0.011; _0.712)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 401 aa (-cTP 321)
Molecular Weight 42.47 kDA(-cTP )
PI 6.01(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help