PPDB

The Plant Proteome Database

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AT1G54210.1   Ubiquitin-like superfamily protein

Lab Annot. ATG12a - (ATG8/12 conjugation pathway)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G54210.3 11Arabidopsis thaliana1E-67961001000 (0)_
AT3G13970.1 11Arabidopsis thaliana2E-609690950 (0)_
AT3G13970.4 11Arabidopsis thaliana1E-437788940 (0)_
Os06g10340.1 7Oryza sativa2E-468576880 (0)_
Zm00001eb256700_P001 agpv5Zea mays2E-489676830 (0)_
GRMZM5G842517_P02 3.21Zea mays2E-489676830 (0)_
GRMZM5G842517_P03 3.21Zea mays3E-357774830 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG12(1) Atg8(1) DUF4264(1)
TargetP: Cytoplasm (Class 4 C0.143; M0.170; S0.092; _0.406)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 96 aa (-cTP 77)
Molecular Weight 10.57 kDA(-cTP )
PI 9.21(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help