PPDB

PPDB	The Plant Proteome Database

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AT1G53980.1 Ubiquitin-like superfamily protein

Lab Annot.

Ubiquitin-like protein
Mapman: 29.5.11.1 protein.degradation.ubiquitin.ubiquitin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G53945.1 11 Arabidopsis thaliana 5E-30 92 63 79 0 (0) _
AT1G53950.1 11 Arabidopsis thaliana 3E-20 76 56 72 0 (0) _
AT4G05320.7 11 Arabidopsis thaliana 7E-08 120 36 43 0 (0) _
Os04g53620.4 7 Oryza sativa 2E-07 120 36 43 91 (91) _
Os02g06640.4 7 Oryza sativa 2E-07 120 36 43 91 (91) _
Os06g46770.6 7 Oryza sativa 2E-07 120 36 43 43 (43) _
v1_GRMZM2G419891_P03 4a53 Zea mays 3E-12 89 50 59 208 (205) _
v1_GRMZM2G118637_P03 4a53 Zea mays 3E-12 89 50 59 208 (205) _
GRMZM2G419891_P03 3.21 Zea mays 3E-12 89 50 59 215 (204) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2501(2) DUF4342(2) Rad60-SLD(2) ubiquitin(2) Ubiquitin_4(2)
TargetP:	Cytoplasm (Class 2 C0.163; M0.060; S0.109; _0.854)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	91 aa (-cTP 39)
Molecular Weight	10.14 kDA(-cTP )
PI	6.73(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data