PPDB

PPDB	The Plant Proteome Database

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AT1G51380.1 DEA(D/H)-box RNA helicase family protein

Lab Annot.

initiation factor 4A (eIF-4A) DExD box RNA helicase RH34
Mapman: 29.2.3 protein.synthesis.initiation; 27.5* RNA.DEAD BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G19760.1 11 Arabidopsis thaliana 0 391 76 89 152 (66) _
AT1G51380.2 11 Arabidopsis thaliana 0 274 100 100 0 (0) _
AT1G51380.4 11 Arabidopsis thaliana 1E-168 233 100 100 0 (0) _
Os01g45190.1 7 Oryza sativa 0 393 72 86 13 (13) _
Os03g36930.1 7 Oryza sativa 0 393 71 86 13 (13) _
Os06g48750.1 7 Oryza sativa 1E-163 370 59 75 79 (79) _
GRMZM2G133764_P02 3.21 Zea mays 0 391 71 86 30 (26) _
GRMZM2G133764_P01 3.21 Zea mays 0 391 71 86 30 (26) _
Zm00001eb190630_P001 agpv5 Zea mays 0 391 71 86 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_19(2) AAA_30(1) AAA_34(1) CbiA(1) CMS1(1) DEAD(1) DUF3638(2) Helicase_C(2) H
TargetP:	Cytoplasm (Class 1 C0.033; M0.038; S0.026; _0.985)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	392 aa (-cTP 329)
Molecular Weight	44.36 kDA(-cTP )
PI	8.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data