PPDB

The Plant Proteome Database

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AT1G50400.1   Eukaryotic porin family protein

Lab Annot. Eukaryotic porin protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G20000.1 11Arabidopsis thaliana7E-153307677979 (72)_
AT3G20000.2 11Arabidopsis thaliana6E-11523668790 (0)_
Os03g20750.1 7Oryza sativa6E-13730762774 (4)_
Os01g16910.1 7Oryza sativa3E-12730158757 (7)_
Zm00001eb015420_P001 agpv5Zea mays3E-14429365790 (0)_
v1_GRMZM2G174696_P01 4a53Zea mays3E-14429365794 (3)_
GRMZM2G174696_P01 3.21Zea mays3E-14429365797 (7)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MDM10(1) OMP_b-brl(2) Porin_3(1)
TargetP: Cytoplasm (Class 2 C0.175; M0.080; S0.052; _0.875)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 310 aa (-cTP 298)
Molecular Weight 34.47 kDA(-cTP )
PI 5.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help