PPDB

 The Plant Proteome Database

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AT1G47270.1   tubby like protein 6
Lab Annot. tubby like protein 6
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G47270.2 11Arabidopsis thaliana041399990 (0)_
AT1G47270.3 11Arabidopsis thaliana03881001000 (0)C
AT2G18280.2 11Arabidopsis thaliana1E-14740556690 (0)_
Os02g47640.1 7Oryza sativa1E-15636661740 (0)_
Os03g22800.1 7Oryza sativa6E-14241352670 (0)M
Os05g36190.1 7Oryza sativa8E-13944748620 (0)M
Zm00001eb252060_P001 agpv5Zea mays6E-15937160740 (0)_
v1_GRMZM2G115701_P01 4a53Zea mays6E-15937160740 (0)_
GRMZM2G115701_P01 3.21Zea mays6E-15937160740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3527(1) F-box(1) F-box-like(1) Tub(1)
TargetP: Cytoplasm (Class 3 C0.266; M0.182; S0.003; _0.700)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 413 aa (-cTP 363)
Molecular Weight 46.06 kDA(-cTP )
PI 9.74(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help