PPDB

PPDB	The Plant Proteome Database

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AT1G20080.1 Calcium-dependent lipid-binding (CaLB domain) family protein

Lab Annot.

ATSYTB/NTMC2T1.2/NTMC2TYPE1.2/SYTB
Mapman: 35.1.19 not assigned.no ontology.C2 domain-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G20080.4 11 Arabidopsis thaliana 0 537 100 100 0 (0) S
AT1G20080.2 11 Arabidopsis thaliana 0 537 100 100 0 (0) S
AT1G20080.5 11 Arabidopsis thaliana 0 537 100 100 0 (0) S
Os02g25060.1 7 Oryza sativa 0 538 70 84 4 (4) S
Os09g36770.3 7 Oryza sativa 0 539 67 84 0 (0) S
Os09g36770.2 7 Oryza sativa 0 539 67 84 0 (0) S
Zm00001eb103760_P003 agpv5 Zea mays 0 539 62 76 0 (0) S
GRMZM2G050193_P03 3.21 Zea mays 0 539 62 76 11 (11) S
v1_GRMZM2G140443_P02 4a53 Zea mays 0 537 51 72 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C2(2) CEP76-C2(3) NT-C2(2) SMP_LBD(1)
TargetP:	Secreted (Class 1 C0.010; M0.028; S0.972; _0.150)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	537 aa (-cTP 529)
Molecular Weight	60.84 kDA(-cTP )
PI	5.62(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21841088(mitochondria (2DE native gel))

Comparative Proteomics Data